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SRX25541279: Experimental evolution of Pseudomonas fluorescens
1 ILLUMINA (Illumina NovaSeq 6000) run: 1M spots, 480.1M bases, 171Mb downloads

Design: Library preparation was performed by Microbes NG
Submitted by: University of Liverpool
Study: Nutrient-rich spatial refuges buffer against extinction and promote evolutionary rescue in evolving microbial populations
show Abstracthide Abstract
Microbial populations are often exposed to long-term chemical disturbances, which can reduce population viability and cause local extinction. Eco-evolutionary theory suggests that spatial refuges can facilitate persistence and evolutionary rescue. However, one drawback of spatial refuges is reduced exposure to nutrients such as carbon and oxygen, suggesting the protective effect of refuges depends on the interplay between environmental conditions and the degree of stress. Here, we tested this general idea using mathematical modelling, and experimental evolution of the model bacterium Pseudomonas fluorescens SBW25 under salinity stress.
Sample: A6
SAMN42957262 • SRS22193647 • All experiments • All runs
Library:
Name: A6
Instrument: Illumina NovaSeq 6000
Strategy: WGS
Source: GENOMIC
Selection: unspecified
Layout: PAIRED
Runs: 1 run, 1M spots, 480.1M bases, 171Mb
Run# of Spots# of BasesSizePublished
SRR300674661,028,338480.1M171Mb2024-08-01

ID:
34528349

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